after speaking with TurboTax there seems to be no solution. The IT-229 form does complete and the credit is detailed on IT-229. The issue seems to be that the credit is detailed on line 12 of IT-201-ATT before moving to line 71 of IT-201. TurboTax is not supporting IT-201-ATT therefore the credit does not reach the final return. 

the funny thing is if you enter the section >other tax credits>refundable credits the projected refund does increase to the correct amount but then it doesn’t support this section so you have to go back and the projected refund falls again. I’m not sure if turbo tax are working on a fix but I imagine this is going to affect a lot of New Yorkers