Thank you for the reply.  I had tried adding to screen 33 as an override to capital gains and although it will export it correctly to the tax return - it doesn't change the 7203 to reflect that it's taxable.

My other issue with Repayment of Loan is that the basis on the balance sheet (R/E plus income plus s/h loan) won't tie out to the 7203 basis as the gain increases the basis on the 7203 so it's higher than the balance sheet.  We usually keep a sheet that has the cumulative gain so we know why there is a difference, but I'm not sure on how to deal with this on the 7203 or if it's ok to have that discrepancy!!