You will need to code your income and expenses properly.  If you are not familiar with how this works, you should refer to the following articles for detailed instructions:

https://proconnect.intuit.com/taxprocenter/practice-management/handling-multi-state-returns-in-proco...

https://proconnect.intuit.com/support/en-us/help-article/form-w-2/create-multi-state-return-proconne...

https://proconnect.intuit.com/support/en-us/help-article/multi-state-taxes/entering-multi-state-amou...

If you still need help after following these instructions, please come back with more info and someone may be able to point you in the right direction.