Common questions about Form 990, 990-PF, 990-T, and 990-N in Lacerte
by Intuit•1• Updated 4 months ago
Table of contents:
Generating/preparing a short-year return
Marking the return for a short year:
- Screen 4.1, Misc. (990-N, 990, 990-PF, 990-T).
- Scroll down to the Tax Year Information subsection.
- Select the box Short tax year for depreciation (if applicable).
- Enter the Beginning fiscal year date [O] (M/D/YYYY).
- Enter the Ending fiscal year date [O] (M/D/YYYY).
- Enter the number of months in Number of months if short year (for annualization).
E-filing the short year return:
- Make a copy of the original return after it's been e-filed, and accepted.
- In the newly copied return, clear the e-file Status;
- From the E-File menu, select e-file Support Tools then Clear Return then Return.
- In Screen 4.1, Miscellaneous, mark the checkbox for File 20YY short year return and enter the applicable Beginning fiscal year date [O] and Ending fiscal year date [O]
- On Screen 1 make sure there are no states in the left column.
- Delete any states listed here.
- Review the return for accuracy.
- Transmit the copied return.

E-file questions for Exempt Organizations in Lacerte.
What forms can be e-filed for Exempt Organization returns (990, 990-T, 4720, states)?
- 990: Main form ✔ | Amended ✔ | Extension/Payment ✔
- 990-T: Main form ✔ | Amended ✘ | Extension/Payment ✔
- FBAR (114): Main form ✔ | Amended ✘ | Extension/Payment ✘
- Form 4720: Main form ✔ | Amended ✔ | Extension/Payment ✔
- California: Main form ✔ | Amended ✔ | Extension/Payment ✘
- Illinois: Main form ✘ | Amended ✘ | Extension/Payment ✘
- New York: Main form ✔ | Amended ✘ | Extension/Payment ✔
When to file?
File Form 990 by the 15th day of the 5th month after the organization’s year end (e.g., May 15 for calendar year). If due date falls on a weekend/holiday, file next business day. 990-series filers can extend 6 months (to November 15 for calendar-year filers). E-files transmitted before local midnight are timely.

How to generate a public disclosure copy for Schedule B?
Lacerte can print a PUBLIC DISCLOSURE COPY of Schedule B:
- Page 1 shows “PUBLIC DISCLOSURE COPY” above the title.
- Other pages omit contributor names/addresses but show contribution data.
Method 1
- Go to Screen 16.1 – Contributions, Gifts, and Grants.
- Miscellaneous – Schedule of Contributors section.
- Check Apply public disclosure copy.
Method 2
- Settings → Options.
- Items to Print tab.
- Set Public Disclosure Copy of Schedule B to Yes.
Additional Information
- If neither condition is set, the complete filing copy (with personal info) is generated.
- The Items to Print setting is per return copy (Preparer/Client/Government). Forms view reflects the Preparer Review copy.
- Public Disclosure Copy cannot be e-filed; doing so triggers rejection SB-F990-013 (contributors’ details required).
Additional information can be found in the full article
Common questions about Exempt Organizations in Lacerte; Click here

Form 990 Critical Diagnostic Reference 6574 unrelated gross income.
- The organization has unrelated gross income of $1,000 or more during the year covered by this return, and has not filed a Form 990-T tax return this year (ref #6574).
This diagnostic generates when one or more items of revenue worth $1,000 or more, are entered as unrelated business income. When the exempt organization has $1,000 or more of unrelated income, Form 990-T is required. Lacerte produces this diagnostic when it detects that Form 990-T is required, but isn't currently generated with the return.
You can clear this diagnostic by either removing the unrelated income or by generating Form 990-T.
To generate Form 990-T:
- Go to Screen 1, Client Information.
- Scroll down to the Return Info section.
- From the dropdown menu select the appropriate 990-T return type.
- The 990-T return should now be generated and the diagnostic cleared.
To resolve this diagnostic without generating Form 990-T:
- Go to Screen 6, Information Questions to the section Compliance (990, Part V and 990EZ, Part V).
- Scroll to the subsection Form 990 and Form 990-EZ and make sure there isn't a 1 entered in the field Unrelated business gross income of $1, 000 or more or lobbying proxy tax: 1=yes, 2=no, 3=N/A (3a) (35a) [O].
- Go to Screen 17, Program Service Revenue.
- Make sure there are no amounts entered in the Unrelated Business Income columns (codes 4, 5 and 6).
- Go to Screen 18, Other Income Producing Act.
- Scroll to the section Unrelated Business Income and make sure there are no entries.
- Go to Screen 20, Other Revenue.
- Make sure there are no entries in the Unrelated Business Income fields.
- Go to Screen 22, Rental Income.
- For each property, make sure there are no entries in the Unrelated Business Income fields in the General Information section.
- Go to Screen 23, Other Investment Income.
- Make sure there are no amounts in the Unrelated Business Income columns.
- Go to Screen 24, Dispositions.
- Select the Misc (C/O, CGD. Etc) link in the top-left menu.
- Make sure there are no entries in the Capital Gain Distributions (1099-DIV) section, in the field for Unrelated business income (2a) (code 208).
- Go to Screen 25, Fundraising and Gaming.
- Select Gaming Information from the top-left menu.
- For each event, make sure there are no entries in the Unrelated business income fields.
- Go to Screen 26, Inventory Sales.
- Make sure there are no entries in the Unrelated Business Income fields.
- Make sure there are no entries in Screens 27, 28, 29, 30, 31 and 32.
- Go to Screen 33, Income Overrides.
- Select Unrelated Business Income Overrides from the left menu.
- Make sure there are no entries on this screen.

Filing Requirements for Form 990-EZ and 990-N.
Form 990-N (e-Postcard) requirements:
Most small tax-exempt organizations whose annual gross receipts are normally $50,000 or less can electronically submit Form 990-N if they choose not to file Form 990 or Form 990-EZ instead. Exceptions to this include:
- Private foundations
- Political organizations
- Supporting organizations
Refer to this IRS resource for more information on who can file Form 990-N.
To generate a 990-N return:
- Go to Screen 1, Client information.
- Under the Electronic Return section, check the box Federal.
- Scroll down to the Return Info section.
- In the Type of return field, select 990-N.
Form 990-EZ requirements.
Most tax-exempt organizations with gross receipts less than $200,000 and total assets at the end of the year less than $500,000 can file Form 990-EZ instead of Form 990. Exceptions to this include:
- Sponsoring organizations of donor advised funds
- Organizations that operate a hospital facility
- Nonprofit health insurance issuers
- Certain controlling organizations defined in section 512(b)(13)
- Private foundations required to file Form 990-PF
- Organizations filing group returns
Refer to the Instructions for Form 990-EZ for more information.

Additional References.
Here are a few articles to answer other frequently asked questions about entering Form 990, Form 990-PF, 990-T and 990-N in Lacerte.
- Generating/Preparing a Short Year Return
- Common questions for Exempt Organizations in Lacerte
- Form 990 Critical Diagnostic Ref. 6574 Unrelated Gross Income
- Filing requirements for Form 990-EZ and 990-N

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